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Jinjun Kan, Ph.D.

584 584 Stroud Water Research Center
Jinjun Kan, Ph.D.

Senior Research Scientist

  • Principal investigator, Microbiology Group.
  • Adjunct professor, Department of Biology, University of Pennsylvania.
  • Adjunct professor, Department of Plant and Soil Sciences, University of Delaware.

Contact

jkan@stroudcenter.org
tel. 610-910-0047
970 Spencer Road, Avondale, PA 19311

https://orcid.org/0000-0001-5331-380X

Interests and Expertise

Jinjun Kan’s interests include environmental microbiology and molecular microbial ecology of aquatic ecosystems, particularly freshwater and estuaries, with a focus on algal, bacterial, archaeal, and viral population dynamics, and interactions with local environments, including trophic interactions, nutrient cycling, and biogeochemistry.

Google Scholar | ResearchGate | Download CV

Education

  • Ph.D., environmental molecular microbiology/biotechnology, University of Maryland, College Park, Maryland.
  • M.S., ecology, First Institute of Oceanography, State Oceanic Administration, Qingdao, China.
  • B.S., ecology and environmental sciences, Ocean University of China, Qingdao, China.

Professional Experience

  • Senior research scientist, Stroud Water Research Center, 2024–present.
  • Associate research scientist, Stroud Water Research Center, 2017–2023.
  • Assistant research scientist, Stroud Water Research Center, 2010–2017.
  • Postdoctoral fellow, University of Southern California, Los Angeles, California, 2006–2010.
  • Research assistant, University of Maryland Biotechnology Institute, College Park, Maryland, 2001–2006.
  • Research assistant, Hong Kong University of Science and Technology, 1999–2001.

Publications

Agricultural soil microbiomes differentiate in soil profiles with fertility source, tillage, and cover crops

Bier, R.L., M. Daniels, D. Oviedo-Vargas, M. Peipoch, J.R. Price, E. Omondi, A. Smith, and J. Kan. 2024. Agriculture, Ecosystems & Environment 368: 109002.

Porewater microbiomes in buried wetland soils: Synergic effects of water chemistry and redox gradients associated with hydrological processes

Kan, J., O. Lazareva, D. Oviedo-Vargas, S.M. McAllister, and C.S. Chan. 2024. Freshwater Biology 69(6): 894–906.

Planktonic eukaryotes in the Chesapeake Bay: Contrasting responses of abundant and rare taxa to estuarine gradients

Hualong, W., F. Liu, M. Wang, Y. Bettarel, Y. Eissler, F. Chen, and J. Kan. 2024. Microbiology Spectrum 2: e04048-23.

Riparian groundwater nitrogen (N) isotopes reveal human imprints of dams and road salt salinization

Inamdar, S., M. Peipoch, M. Sena, B, Joshi, M.M. Rahman, J. Kan, E.K. Peck, A. Gold, T.L.E. Trammell, and P.M. Groffman. 2024. Geophysical Research Letters 51(5): e2023GL106888.

Back from the past? Assessment of nitrogen removal ability of buried historic wetland soils before and after a 1-year incubation on a restored floodplain

Peck, E.K., S. Inamdar, J. Kan, M. Peipoch, A.J. Gold, D.J. Merritts, R.C. Walter, E.G. Hyland, K.W. Wegmann, A.M. Yaculak, and M.M. Rahman. 2024. Restoration Ecology 32(3): e14070.

See all publications by Stroud Center authors

Sharing Our Science: Summer 2014

Stroud Center Scientists Attend International Conferences; Leaf Pack Network Science Hits the Road; 24 Hours, 55 Volunteers, 807 Species; Walking the Walk at Spring Creek Farms Field Day; Cultivating the Next Generation of Scientists.

UpStream Newsletter, December 2013

Stroud Center scientists find mayflies, whose presence indicates good water quality, are significantly affected by low levels of fracking wastewater.

UpStream Newsletter, April 2013

The River Continuum Concept remains the most often cited paper in its field. So, when Melinda Daniels, Ph.D., wrote “The River Discontinuum,” people noticed.

UpStream Newsletter, February 2013

Meet Jen Mosher, Post-Doctoral Associate: As one of the Stroud Center’s post-doctoral researchers, exploring the outdoors is in Mosher's job description, and she wouldn’t have it any other way.

UpStream Newsletter, Summer 2012

The board of directors cut the ribbon on a new building for environmental education and public outreach that models sustainable practices for managing water.

UpStream Newsletter, Fall 2011

Gone Fishin’: Evaluating the Threat of Agricultural Contaminants in the Río Sierpe This article has moved. The Magic of Revealing the Mysteries of Metaecosystems By Diane Huskinson Abracadabra “Any sufficiently
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