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Microbiology Group

355 279 Stroud Water Research Center

Microbial life such as bacteria, fungi, and algae are integral to a naturally functioning aquatic ecosystem. By applying comprehensive molecular approaches, this laboratory is focused on characterizing the composition and distribution of microbial communities, and determining the functional roles as well as their interactions with environments.

Staff

Jinjun Kan, Ph.D.

Jinjun Kan, Ph.D.

Senior Research Scientist
Laura Zgleszewski

Laura Zgleszewski

Staff Scientist

News

An aerial view of Choptank River Wetlands.
Whose Mud Is It? DNA Tracks Sediment Pollution in Chesapeake Bay
Stroud Center scientists used microbial DNA to trace sediment pollution in Maryland estuaries, helping managers target Chesapeake Bay restoration efforts more effectively.
Publication title with image of a mayfly
Interception of river sediment in estuaries revealed by microbial community source tracking
Kan, J., and S.H. Ensign. 2026. Estuaries and Coasts 49, 55.
Publication title with image of a mayfly
Distinct changes in riparian sediment microbial communities with depth and time since dam removal
Moore, E.R., M.M. Rahman, J.G. Galella, M. Sena, B. Joshi, A. Yaculak, M. Peipoch, J. Kan, and S. Inamdar. 2026. Nature Scientific Reports 16: article 6885.
Publication title with image of a mayfly
Road salt impacts on soil properties and permanent nitrogen removal capacity of freshwater urban wetlands
Rahman, M.M., M. Peipoch, J. Kan, E. Moore, M. Sena, M. Kantak, S. Sharma, C. Lekha, and S.P. Inamdar. 2026. Wetlands 46, 14.
Publication title with image of a mayfly
Freshwater salinization syndrome is degrading streamwater quality in the National Capital Region national parks, USA
Myers, D.T., D. Oviedo-Vargas, S. Ensign, M. Daniels, J.P. Schmit, M. Peipoch, and J. Kan. 2025. Freshwater Science 54(1): 18–30.
Publication title with image of a mayfly
High-frequency soil redox data provide novel insights into biogeochemical hot spots and hot moments
Sena, M.G., B. Joshi, M.M. Rahman, M. Peipoch, J. Kan, E. Moore, M. Afsar, Y. Jin, D. Dwivedi, E. Peck, and S. Inamdar. 2025. Hydrological Processes 39(12): e70367.

Publications

Interception of river sediment in estuaries revealed by microbial community source tracking

Kan, J., and S.H. Ensign. 2026. Estuaries and Coasts 49, 55.

Distinct changes in riparian sediment microbial communities with depth and time since dam removal

Moore, E.R., M.M. Rahman, J.G. Galella, M. Sena, B. Joshi, A. Yaculak, M. Peipoch, J. Kan, and S. Inamdar. 2026. Nature Scientific Reports 16: article 6885.

Road salt impacts on soil properties and permanent nitrogen removal capacity of freshwater urban wetlands

Rahman, M.M., M. Peipoch, J. Kan, E. Moore, M. Sena, M. Kantak, S. Sharma, C. Lekha, and S.P. Inamdar. 2026. Wetlands 46, 14.

Freshwater salinization syndrome is degrading streamwater quality in the National Capital Region national parks, USA

Myers, D.T., D. Oviedo-Vargas, S. Ensign, M. Daniels, J.P. Schmit, M. Peipoch, and J. Kan. 2025. Freshwater Science 54(1): 18–30.

High-frequency soil redox data provide novel insights into biogeochemical hot spots and hot moments

Sena, M.G., B. Joshi, M.M. Rahman, M. Peipoch, J. Kan, E. Moore, M. Afsar, Y. Jin, D. Dwivedi, E. Peck, and S. Inamdar. 2025. Hydrological Processes 39(12): e70367.