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Microbiology Group

355 279 Stroud Water Research Center

Microbial life such as bacteria, fungi, and algae are integral to a naturally functioning aquatic ecosystem. By applying comprehensive molecular approaches, this laboratory is focused on characterizing the composition and distribution of microbial communities, and determining the functional roles as well as their interactions with environments.

Staff

Jinjun Kan, Ph.D.

Jinjun Kan, Ph.D.

Senior Research Scientist
Laura Zgleszewski

Laura Zgleszewski

Staff Scientist

News

Publication title with image of a mayfly
High-frequency soil redox data provide novel insights into biogeochemical hot spots and hot moments
Sena, M.G., B. Joshi, M.M. Rahman, M. Peipoch, J. Kan, E. Moore, M. Afsar, Y. Jin, D. Dwivedi, E. Peck, and S. Inamdar. 2025. Hydrological Processes 39(12): e70367.
Publication title with image of a mayfly
Modeling the competition and controls for denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in riparian sediments
Joshi, B., D. Dwivedi, M.M. Rahman, M.G. Sena, E.R. Moore, J.G. Galella, M. Peipoch, J. Kan, P. Imhoff, and S. Inamdar. 2025. Journal of Geophysical Research: Biogeosciences 130(12): e2025JG009072.
A cross-section showing cover crop roots growing deeply into the soil.
Harnessing Machine Learning for Sustainable Farming and Water Protection
DNA sequencing technology produces mind-boggling quantities of raw data. This is where machine learning is set to open a new expanse of knowledge.
A streambank before riparian reforestation.
Digging Into Soil Health
Healthy soil is the foundation of a thriving ecosystem and clean surface water; yet it’s often an overlooked element in restoration work.
Abigail Duimering samples macroinvertebrates in White Clay Creek.
Wading Through Disciplines
From aquatic insects to microbial DNA, an intern explores how collaboration across disciplines advances stream and soil health research.
Publication title with image of a mayfly
Reduction in nitrification during the early transition from conventional to organic farming practices
Price, J.R., D. Oviedo-Vargas, M. Peipoch, M.D. Daniels, and J. Kan. 2025. Ecosphere 16(8): e70375.

Publications

High-frequency soil redox data provide novel insights into biogeochemical hot spots and hot moments

Sena, M.G., B. Joshi, M.M. Rahman, M. Peipoch, J. Kan, E. Moore, M. Afsar, Y. Jin, D. Dwivedi, E. Peck, and S. Inamdar. 2025. Hydrological Processes 39(12): e70367.

Modeling the competition and controls for denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in riparian sediments

Joshi, B., D. Dwivedi, M.M. Rahman, M.G. Sena, E.R. Moore, J.G. Galella, M. Peipoch, J. Kan, P. Imhoff, and S. Inamdar. 2025. Journal of Geophysical Research: Biogeosciences 130(12): e2025JG009072.

Reduction in nitrification during the early transition from conventional to organic farming practices

Price, J.R., D. Oviedo-Vargas, M. Peipoch, M.D. Daniels, and J. Kan. 2025. Ecosphere 16(8): e70375.

Biogeochemical recovery and role of ancient hydric soils in contemporary floodplain restorations

Yaculak, A.M., J. Kan, M. Peipoch, J.G. Galella, E.K. Peck, S.S. Kaushal, T.L.E. Trammell, and S.P. Inamdar. 2025. Ecological Engineering 220: 107733.

Streptomyces coelicolor-plant association facilitates ergothioneine (EGT) uptake in Triticum aestivum

Pipinos, A., J. Kan, G. Zinati, A. Smith, and H. Bais. 2025. Frontiers in Microbiology 16: 1637050.