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Microbiology Group

355 279 Stroud Water Research Center

Microbial life such as bacteria, fungi, and algae are integral to a naturally functioning aquatic ecosystem. By applying comprehensive molecular approaches, this laboratory is focused on characterizing the composition and distribution of microbial communities, and determining the functional roles as well as their interactions with environments.

Staff

Jinjun Kan, Ph.D.

Jinjun Kan, Ph.D.

Senior Research Scientist
Laura Zgleszewski

Laura Zgleszewski

Staff Scientist

News

Publication title with image of a mayfly
Soil health metrics for assessment of floodplain restorations
Galella, J.G., M.M. Rahman, E.R. Moore, M. Peipoch, J. Kan, A.M. Yaculak, M. Sena, B. Joshi, S.S. Kaushal, and S. Inamdar. 2025. Environmental Research Letters 20(8): 084010.
Mandy Cabot and Peter Kjellerup with two Silk Grass Farms staff members.
Silk Grass Farms is a Force for Good
To understand the state of its water resources and how to protect them, Silk Grass Farms asked the Stroud Center to provide expert guidance.
Publication title with image of a mayfly
High fecal indicator bacteria in temperate headwater streams at baseflow: implications for management and public health
D.T. Myers, L. Zgleszewski, R. Bier, J.R. Price, S. Morgan, J.K. Jackson, D. Oviedo-Vargas, M. Daniels, D.B. Arscott, J. Kan. 2025. Water Research X 29: 100347.
Publication title with image of a mayfly
Seasonal variation and key controls of groundwater ammonium concentrations in hypoxic/anoxic riparian sediments
Sena, M.G., M. Peipoch, B. Joshi, M.M. Rahman, E. Peck, A.J. Gold, J. Kan, and S. Inamdar. 2025. Journal of Geophysical Research Biogeosciences 130(2): e2023JG007900.
Publication title with image of a mayfly
Evaluation of soil properties and bulk δ15N to assess decadal changes in floodplain denitrification following restoration
Galella, J.G., M.M. Rahman, A.M. Yaculak, M. Peipoch, J. Kan, M. Sena, B. Joshi, S.S. Kaushal, and S. Inamdar. 2025. Restoration Ecology 33(1): e14327.
Publication title with image of a mayfly
Vertical heterogeneity enhances network complexity and stability of co-occurrence microbes in the eastern Indian Ocean
Zhang, C., F. Liu, Y. Zou, C. Wang, H. Zhang, B. Wang, J. Kan, A. McMinn, H. Wang, and M. Wang. 2024. Environmental Research 263(3): 120225.

Publications

Seasonal variation and key controls of groundwater ammonium concentrations in hypoxic/anoxic riparian sediments

Sena, M.G., M. Peipoch, B. Joshi, M.M. Rahman, E. Peck, A.J. Gold, J. Kan, and S. Inamdar. 2025. Journal of Geophysical Research Biogeosciences 130(2): e2023JG007900.

Evaluation of soil properties and bulk δ15N to assess decadal changes in floodplain denitrification following restoration

Galella, J.G., M.M. Rahman, A.M. Yaculak, M. Peipoch, J. Kan, M. Sena, B. Joshi, S.S. Kaushal, and S. Inamdar. 2025. Restoration Ecology 33(1): e14327.

Vertical heterogeneity enhances network complexity and stability of co-occurrence microbes in the eastern Indian Ocean

Zhang, C., F. Liu, Y. Zou, C. Wang, H. Zhang, B. Wang, J. Kan, A. McMinn, H. Wang, and M. Wang. 2024. Environmental Research 263(3): 120225.

Agricultural practices influence soil microbiome assembly and interactions at different depths identified by machine learning

Mo, Y., R. Bier, X. Li, M. Daniels, A. Smith, L. Yu, and J. Kan. 2024. Communications Biology 7, 1349.

Agricultural practices influence soil microbiome assembly and interactions at different depths identified by machine learning

Mo, Y., R. Bier, X. Li, M. Daniels, A. Smith, and J. Kan. 2024. Communications Biology 7: 1349.