Menu

Microbiology Group

355 279 Stroud Water Research Center

Microbial life such as bacteria, fungi, and algae are integral to a naturally functioning aquatic ecosystem. By applying comprehensive molecular approaches, this laboratory is focused on characterizing the composition and distribution of microbial communities, and determining the functional roles as well as their interactions with environments.

Staff

Jinjun Kan, Ph.D.

Jinjun Kan, Ph.D.

Associate Research Scientist
Laura Zgleszewski

Laura Zgleszewski

Staff Scientist

News

UpStream Newsletter, Winter 2009
UpStream Newsletter, Winter 2009
After almost three years at the National Institute of Water and Atmospheric Research in New Zealand, Dave Arscott will return to serve as the Stroud Center’s assistant director.
Publication title with image of a mayfly
Primary productivity and community respiration
Bott, T.L. 2006. Pages 263–290 in F.R. Hauer and G.A. Lamberti (editors). Methods in stream ecology. 2nd edition. Elsevier, New York, New York.
A stream cascade in Lofty Creek, Pennsylvania.
Primary productivity in receiving reservoirs: links to influent streams
Bott, T.L., D.S. Montgomery, D.B. Arscott, and C.L. Dow. 2006. Journal of the North American Benthological Society 25(4):1045–1061.
Publication title with image of a mayfly
Ecosystem metabolism in streams of the Catskill Mountains (Delaware and Hudson River watersheds) and Lower Hudson Valley
Bott, T.L., D.S. Montgomery, J.D. Newbold, D.B. Arscott, C.L. Dow, A.K. Aufdenkampe, J.K. Jackson, and L.A. Kaplan. 2006. Journal of the North American Benthological Society 25(4):1018–1044.
Publication title with image of a mayfly
Ecosystem metabolism in Piedmont streams: reach geomorphology modulates the influence of riparian vegetation
Bott, T.L., J.D. Newbold, and D.B. Arscott. 2006. Ecosystems 9:398–421.
Publication title with image of a mayfly
Riparian deforestation, stream narrowing, and loss of stream ecosystem services
Sweeney, B.W., T.L. Bott, J.K. Jackson, L.A. Kaplan, J.D. Newbold, L.J. Standley, W.C. Hession, and R.J. Horwitz. 2004. Proceedings of the National Academy of Sciences 101(30):14132–14137.

Publications

Trifluoroacetate, an atmospheric breakdown product of hydrofluorocarbon refrigerants: biomolecular fate in aquatic organisms

Standley, L.J., and T.L. Bott. 1998. Environmental Science and Technology 32:469–475.

Organic matter dynamics in White Clay Creek, Pennsylvania, USA

Newbold, J.D., T.L. Bott, L.A. Kaplan, B.W. Sweeney, and R.L. Vannote. 1997. Journal of the North American Benthological Society 16:46–50.

An evaluation of techniques for measuring periphyton metabolism in chambers

Bott, T.L., J.T. Brock, A. Baattrup-Pedersen, P. Chambers, W.K. Dodds, K. Himbeault, J.R. Lawrence, D. Planas, E. Snyder, and G.M. Wolfaardt. 1997. Canadian Journal of Fisheries and Aquatic Sciences 54:715–725.