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Scientific rigor is critical to building trust in the stewardship measures we recommend. Peer-reviewed publication of our freshwater research, environmental education, and watershed restoration activities is a fundamental communication tool.

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Physiological responses to short-term thermal stress in mayfly (Neocloeon triangulifer) larvae in relation to upper thermal limits

Kim, K. S., H. Chou, D. H. Funk, J. K. Jackson, B. W. Sweeney, and D. B. Buchwalter. 2017. Journal of Experimental Biology 220:2598–2605.

Archaea dominate the ammonia-oxidizing community in deep-sea sediments of the Eastern Indian Ocean – from the Equator to the Bay of Bengal

Wang, J., J. Kan, X. Zhang, Z. Xia, X. Zhang, G. Qian, Y. Miao, X. Leng, and J. Sun. 2017. Frontiers in Microbiology 8:415.

Influence of experimental extreme water pulses on greenhouse gas emissions from soils

Petrakis, S., A. Seyfferth, J. Kan, S. Inamdar, and R. Vargas. 2017. Biogeochemistry 133(2):147–164.

Colonization and diversification of aquatic insects on three Macronesian archipelagos using 59 nuclear loci derived from a draft genome

Rutschmann, S., H. Detering, S. Simon, D. H. Funk, J-L. Gattolliat, S. J. Hughes, P. M. Raposeiro, R. DeSalle, M. Sartori, M. T. Monaghan. 2017. Molecular Phylogenetics and Evolution 107:27–38.

Dissimilatory microbial iron reduction release DOC (dissolved organic carbon) from carbon-ferrihydrite association

Pan, W., J. Kan, S. Inamdar, C. Chen, and D. Sparks. 2016. Soil Biology and Biochemistry 103:232–240.

Beryllium-7 wet deposition variation with storm height, synoptic classification, and tree canopy state in the mid-Atlantic USA

Karwan, D. L., C. M. Siegert, D. F. Levia, J. Pizzuto, J. Marquard, R. Aalto, A. K. Aufdenkampe. 2016. Hydrological Processes 30(1):75–89.

A snapshot on spatial and vertical distribution of bacterial communities in the Eastern Indian Ocean

Wang, J., L. Borecki, X. Zhang, D. Wang, J. Kan, and J. Sun. 2016. Acta Oceanologica Sinica 35:85–93.

Mating behavior of Phyllopalpus pulchellus Uhler (Orthoptera: Gryllidae: Trigonidiinae)

D. H. Funk. 2016. Journal of Orthoptera Research 25:7–13.

Bioaccumulation dynamics of arsenate at the base of aquatic food webs

Lopez, A. R., D. R. Hesterberg, D. H. Funk, and D. B. Buchwalter. 2016. Environmental Science & Technology 50(12):6556–6564.

River conservation, restoration, and preservation: rewarding private behavior to enhance the commons

Sweeney, B. W., and J. G. Blaine. 2016. Freshwater Science 35:755–763.

Observations Data Model 2: A community information model for spatially discrete Earth observations

Horsburgh, J. S., A. K. Aufdenkampe, E. Mayorga, K. A. Lehnert, L. Hsu, L. Song, A. S. Jones, S. G. Damiano, D. G. Tarboton, D. Valentine, I. Zaslavsky, and T. Whitenack. 2016. Environmental Modelling & Software, 79:55–74.

Seasonal dynamics of the soil microbial community structure within the proximal area of tree boles: Possible influence of stemflow

Rosier, C. L., D. F. Levia, J. T. Van Stan, A. K. Aufdenkampe, J. Kan. 2016. European Journal of Soil Biology 73:108–118.

Geochemistry and mixing drive the spatial distribution of free-living archaea and bacteria in Yellowstone Lake

Kan, J., S. Clingenpeel, C. L. Dow, T. R. McDermott, R. E. Macur, W. P. Inskeep, and K. H. Nealson. 2016. Frontiers in Microbiology 7(210):1–13.

Part 2: Sensitivity comparisons of the mayfly Centroptilum triangulifer to Ceriodaphnia dubia and Daphnia magna using standard reference toxicants; NaCl, KCl and CuSO4

Struewing, K. A., J. M. Lazorchak, P. C. Weaver, B. R. Johnson, D. H. Funk, and D. B. Buchwalter. 2015. Chemosphere 139, 597-603.

Part 1: Laboratory culture of Centroptilum triangulifer (Ephemeroptera: Baetidae) using a defined diet of three diatoms

Weaver, P. C., J. M. Lazorchak, K. A. Struewing, S. J. DeCelles, D. H. Funk, D. B. Buchwalter, and B. R. Johnson. 2015. Chemosphere 139:589–596.

Geomicrobiology of sublacustrine thermal vents in Yellowstone Lake: geochemical controls on microbial community structure and function

Inskeep, W. P., Z. J. Jay, R. E. Macur, S. Clingenpeel, A. Tenney, D. Lovalvo, J. P. Beam, M. A. Kozubal, W. C. Shanks, L. A. Morgan, J. Kan, Y. Gorby, S. Yooseph, and K. Nealson. 2015. Frontiers in Microbiology 6:1044.

First record of a large-scale bloom-causing species Nannochloropsis granulata (Monodopsidaceae, Eustigmatophyceae) in China Sea Waters

Zhang, X., J. Kan, J. Wang, H. Gu, J. Hu, Y. Zhao, and J. Sun. 2015. Ecotoxicology 24:1430–1441.

The geochemical transformation of soils by agriculture and its dependence on soil erosion: An application of the geochemical mass balance approach

Yoo, K., B. Fisher, J. Ji, A. Aufdenkampe, J. Klaminder. 2015.  Science of the Total Environment 521:326–335.

Chapter 2 -The Role of Critical Zone Observatories in Critical Zone Science

White, T., S. Brantley, S. Banwart, J. Chorover, W. Dietrich, L. Derry, K. Lohse, S. Anderson, A. Aufdenkampe, R. Bales, P. Kumar, D. Richter, B. McDowell. 2015. Pages 15–17 in John R. Giardino and Chris Houser (editors). Developments in earth surface processes: Principles and dynamics of the Critical Zone.

Forest canopy structural controls over throughfall affect soil microbial community structure in an epiphyte-laden maritime oak stand

Rosier, C., J. van Stan, L. Moore, J. Schrom, T. Wu, J. Reichard, and J. Kan. 2015. Ecohydrology 8:1459–1470.

Dynamic hydrologic and biogeochemical processes drive microbially enhanced iron and sulfur cycling within the intertidal mixing zone of a beach aquifer

McAllister, S. M., J. M. Barnett, J. W. Heiss, A. J. Findlay, D. J. MacDonald, C. L. Dow, G. W. Luther III, H. A. Michael, and C. S.Chan. 2015. Limnology and Oceanography 60:329–345.

Elevated major ion concentrations inhibit larval mayfly growth and development

Johnson, B. R., P. C. Weaver, C. T. Nietch, J. M. Lazorchak, K. A. Struewing, and D. H. Funk. 2015. Environmental Toxicology and Chemistry 34(1):167–172.

Impact of exotic earthworms on organic carbon sorption on mineral surfaces and soil carbon inventories in a northern hardwood forest

Lyttle, A., K. Yoo, C. Hale, A. K. Aufdenkampe, S. D. Sebestyen, K. Resner, A. Blum. 2015. Ecosystems 18(1):16–29.

Invasive earthworms deplete key soil inorganic nutrients (Ca, Mg, K, and P) in a northern hardwood forest

Resner, K., K. Yoo, C. Hale, A. K. Aufdenkampe, S. D. Sebestyen, A. Lyttle, A. Blum. 2015. Ecosystems 18(1):89–102.

Spatial distribution and ecosystem effects of a nuisance, bloom-forming diatom (Didymosphenia geminata) in Catskill Mountain streams, New York

Richardson, D. C., I. A. Oleksy, T. J. Hoellein, D. B. Arscott, C. A. Gibson, and S. M. Root. 2014. Aquatic Sciences 76:553.

Improved performance of the PacBio SMRT technology for 16S rDNA sequencing

Mosher, J.J., B. Bowman, E.L. Bernberg, O. Shevchenko, J. Kan, J. Korlach, and L.A. Kaplan. 2014. Journal of Microbiological Methods 104:59–60.

Science, not politics, should guide Clean Water Act clarification

Water, like air, transcends state, legislative and private property boundaries. Whatever happens upstream affects us all.

A stressful shortness of breath: molting disrupts breathing in the mayfly Cloeon dipterum

Camp, A. A., D. H. Funk, and D. B. Buchwalter. 2014. Freshwater Science 33(3):695–699.

Coupled geochemical and biogeochemical characterization of dissolved organic matter from a headwater stream

Sleighter, R. L., R. M. Cory, L. A. Kaplan, H. A. N. Abdulla, and P. G. Hatcher. 2014. Journal of Geophysical Research: Biogeochemistry 119(8):1520–1537.

The delivery of dissolved organic carbon from a forested hillslope to a headwater stream in southeastern Pennsylvania, USA

Mei, Y., G. M. Hornberger, L. A. Kaplan, J. D. Newbold, and A. K. Aufdenkampe. 2014 . Water Resources Research 50(7):5774–5796.

Systematics and acoustics of North American Anaxipha (Gryllidae: Trigonidiinae)

Walker, T. J., and D. H. Funk. 2014. Journal of Orthoptera Research 23:1–38.

Streamside forest buffer width needed to protect stream water quality, habitat, and organisms: a literature review

Sweeney, B. W., and J. D. Newbold. 2014. Journal of the American Water Resources Association 50:560–584.

Community-developed geoscience cyberinfrastructure

Richard, S. M., G. Pearthree, A. K. Aufdenkampe, J. Cutcher-Gershenfeld, M. Daniels, B. Gomez, D. Kinkade, and G. Percivall. 2014 . Eos, Transactions American Geophysical Union 95(20):165–166.

Linking seasonal inorganic nitrogen shift to the dynamics of microbial communities in the Chesapeake Bay

Hong, Y., X. Xu, J. Kan, and F. Chen. 2014. Applied Microbiology and Biotechnology 98:3219–3229.

Does DNA barcoding improve performance of traditional stream bioassessment metrics?

Stein, E. D., B. P. White, R. D. Mazor, J. K. Jackson, J. M. Battle, P. E. Miller, E. M. Pilgrim, and B. W. Sweeney. 2014. Freshwater Science 33(1):302–311.

A variable source area for groundwater evapotranspiration: impacts on modeling stream flow

Tsang, Y.P., G. Hornberger, L. A. Kaplan, J. D. Newbold, and A. K. Aufdenkampe. 2014. Hydrological Processes 28(4):2439–2450.

Soil organic matter stability in organo-mineral complexes as a function of increasing C loading

Feng, W., A. F. Plante, A. K. Aufdenkampe, J. Six. 2014. Soil Biology and Biochemistry 69:398–405.

Cryptic biodiversity in streams: A comparison of macroinvertebrate communities based on morphological and DNA barcode identifications

Jackson, J. K., J. M. Battle, B. P. White, E. M. Pilgrim, E. D. Stein, P. E. Miller, and B. W. Sweeney. 2014. Freshwater Science 33(1):312–324.

Response of benthic macroinvertebrates to gradients in hydrological connectivity: a comparison of temperate, subtropical, Mediterranean and semiarid river floodplains

Gallardo, B., S. Dolédec, A. Paillex, D. B. Arscott, F. Sheldon, F. Zilli, S. Mérigoux, E. Castella, and F. A. Comín. 2014. Freshwater Biology 59:630–648.

Open data: crediting a culture of cooperation

Bolukbasi, B., N. Berente, J. Cutcher-Gershenfeld, L. Dechurch, C. Flint, M. Haberman, A. K. Aufdenkampe, J. Bass, J. Crowell, M. D. Daniels, S. Diggs, C. Duffy, Y. Gil, B. Gomez, S. Graves, R. Hazen, L. Hsu, D. Kinkade, K. Lehnert, C. Marone, D. Middleton, A. Noren, G. Pearthree, M. Ramamurthy, E. Robinson, G. Percivall, S. Richard, C. Suarez, and D. Walker. 2013. Science 342(6162):1041–1042.

Efficacy of a third generation high-throughput sequencing platform for analyses of 16S rRNA genes from environmental samples

Mosher, J.J., E.L. Bernberg, O. Shevchenko, J. Kan, and L.A. Kaplan. 2013. Journal of Microbiological Methods 95:175–181.

Electricity generation from microbial fuel cell using microorganisms as catalyst in cathode

Jang, J.K, J. Kan, O. Bretschger, Y.A. Gorby, L. Hsu, B.H. Kim, and K.H. Nealson. 2013. Journal of Microbiology and Biotechnology 23(12):1765–1773.

Yellowstone Lake Nanoarchaeota

Clingenpeel, S., J. Kan, R. E. Macur, T. Woyke, D. Lovalvo, J. Varley, W. P. Inskeep, K. H. Nealson, and T. McDermott. 2013. Frontiers in Microbiology 4:274.

Biological lability of dissolved organic carbon in stream water and contributing terrestrial sources

McLaughlin, C., and L. A. Kaplan. 2013. Biological lability of dissolved organic carbon in stream water and contributing terrestrial sources. Freshwater Science 32(4):1219–1230.

Apatite and chitin amendments promote microbial activity and augment metal removal in marine sediments

Kan, J., A. Obraztsova, Y. Wang, J. Leather, K. G. Scheckel, K. H. Nealson, and Y. M. Arias-Thode. 2013. OJMetal, Heavy Metal Special Issue. 3:51–61.

Bioconcentration and biotransformation of selenite versus selenate exposed periphyton and subsequent toxicity to the mayfly Centroptilum triangulifer

Conley, J. M., D. H. Funk, D. H. Hesterberg, L-C Hsu, J. Kan, Y-T Liu, and D. B. Buchwalter. 2013. Environmental Science & Technology 47:7965–7973.

Measuring heterotrophic respiration rates of suspended particulate organic carbon from stream ecosystems

Richardson, D. C., J. D. Newbold, A. K. Aufdenkampe, P. G. Taylor, L. A. Kaplan. 2013. Limnology and Oceanography Methods 11:247–261.

Adaptation of soil microbes during establishment of microbial fuel cell consortium fed with lactate

Futamata, H., O. Bretschger, A. Cheung, J. Kan, R. Owen, and K.H. Nealson. 2013. Journal of Bioscience and Bioengineering 115(1):58–63.

Late Miocene through early Pleistocene nutrient utilization and export production in the Antarctic Zone of the Southern Ocean

Billups, K., A. K. Aufdenkampe, and R. Hays. 2013. Global and Planetary Change 100:353–361.

The scientific names of two common Florida crickets (Orthoptera, Gryllidae)

Walker, T. J., and D. H. Funk. 2012. Florida Entomologist 95:936–938.

Abandoned coal mine drainage and its remediation: impacts on stream ecosystem structure and function

Bott, T. L., J. K. Jackson, M. McTammany, J. D. Newbold, S. Rier, B. W. Sweeney, and J. Battle. 2012. Ecological Applications 22:2144–2163.

Dam design can impede adaptive management of environmental flows: a case study from the Opuha Dam, New Zealand

Lessard, J., D.M. Hicks, T.H. Snelder, D.B. Arscott, S.T. Larned, D. Booker, and A.M. Suren. 2013. Environmental Management 51(2):459–473.

Dietary (periphyton) and aqueous Zn bioaccumulation dynamics in the mayfly Centroptilum triangulifer

Mei, Y., G. M. Hornberger, L. A. Kaplan, J. D. Newbold, and A. K. Aufdenkampe. 2012. Water Resources Research 48(9):W09514.

Estimation of dissolved organic carbon contribution from hillslope soils to a headwater stream

Mei, Y., G. M. Hornberger, L. A. Kaplan, J. D. Newbold, and A. K. Aufdenkampe. 2012. Water Resources Research 48(9):W09514.

Biological lability of streamwater fluorescent dissolved organic matter

Cory, R. M., and L. A. Kaplan. 2012. Limnology and Oceanography 57(5):1347–1360.

Taxonomic certification versus the scientific method: a rebuttal of Rogers (2012)

Stribling, J., B. W. Sweeney, J. Morse, G. Corkum, G. Lester, S. Miller, R. Mitchell, B. Poulton, S. Strachan, and M. Wetzel. 2012. Zootaxa 3359: 65–68.

Electricity generation from a floating marine microbial fuel cell

Huang, Y., Z. He, J. Kan, A.K. Manohar, K.H. Nealson, and F. Mansfeld. 2012. Bioresource Technology 114:308–313.

The Crabby Creek initiative: Building and sustaining an interdisciplinary community partnership

Terlecki, M., D. Dunbar, C. Nielsen, C. McGauley, L. Ratmansky, N. L. Watterson, J. Hannum, K. Seidler, E. Bongiorno, O. Owens, P. Goodman, C. Marshall, S. Gill, K. Travers, J. Jackson. 2010. Journal of Community Engagement and Scholarship 3(1):40–50.

A DNA barcode library for North American Ephemeroptera: Progress and prospects

Webb, J. M., L. M. Jacobus, D. H. Funk, X. Zhou, B. Kondratieff, C. J. Geraci, R. E. DeWalt, D. J. Baird, B. Richard, I. Phillips, and P. D. N. Hebert. 2012. Plos One 7(5):e38063.

An initial investigation into the organic matter biogeochemistry of the Congo River

Spencer, R. G. M., P. J. Hernes, A. K. Aufdenkampe, A. Baker, P. Gulliver, A. Stubbins, G. R. Aiken, R. Y. Dyda, K. D. Butler, V. L. Mwamba, A. M. Mangangu, J. N. Wabakanghanzi, and J. Six. 2012. Geochimica et Cosmochimica Acta 84:614–627.

Factors controlling water-column respiration in rivers of the central and southwestern Amazon Basin

Ellis, E. E. E., J. E. Richey, A. K. Aufdenkampe, A. V. Krusche, P. D. Quay, C. Salimon, and H. B. da Cunha. 2012. Limnology and Oceanography 57(2):527–540.

Interannual dynamics of viriobenthos abundance and morphological diversity in Chesapeake Bay sediments

Helton, R.R., K. Wang, J. Kan, D.H. Powell, and K.E. Wommack. 2012. FEMS Microbiology Ecology 79:474–486.

Gryllus mandevillus (Orthoptera: Gryllidae) is a valid field cricket species

Weissman, D. B., D. H. Funk, and T. J. Walker. 2012. Zootaxa 3202:65–68.

Sustained losses of bioavailable nitrogen from montane tropical forests

Brookshire, E. N. J., L. O. Hedin, J. D. Newbold, D. M. Sigman, and J. K. Jackson. 2012. Nature Geoscience 5:123-126.

The impact of terrestrial dissolved organic carbon on stream ecosystems through an investigation of hydrologic sources

McLaughlin, Christine. 2012. Ph.D. dissertation. University of Pennsylvania, Philadelphia. Adviser: L.A. Kaplan.

Food rationing affects dietary selenium bioaccumulation and life cycle performance in the mayfly Centroptilum triangulifer

Conley, J. M., D. H. Funk, N. J. Cariello, and D. B. Buchwalter. 2011. Ecotoxicology 20:1840–1851.

Marine bacterial community response to inorganic and organic amendments in marine sediments

Kan, J., Y. Wang, A. Obraztsova, G. Rosen, J. Leather, K. Scheckel, K.H. Nealson, and Y.M. Arias-Thode. 2011. Ecotoxicology and Environmental Safety 74:1931–1941.

Recent perspectives on temporary river ecology

Datry, T., D. Arscott, and S. Sabater. 2011. Aquatic Sciences–Research Across Boundaries 73(4):453–457.

The initial design of data sharing infrastructure for the Critical Zone Observatory

Zaslavsky, I., T. Whitenack, M. Williams, D. Tarboton, K. Schreuders, and A. K. Aufdenkampe. 2011. Pages 145-150 in M. B. Jones and C. Gries (editors). Proceedings of the Environmental Information Management Conference 2011. University of California, Santa Barbara, California.

Diverse bacterial groups are associated with corrosive lesions at a Granite Mountain Record Vault (GMRV)

Kan, J., P. Chellamuthu, A. Obraztsova, J.E. Moore, and K.H. Nealson. 2011. Journal of Applied Microbiology 111:329–337.

Elemental and mineralogical changes in soils due to bioturbation along an earthworm invasion chronosequence in Northern Minnesota

Resner, K., K. Yoo, C. Hale, A. K. Aufdenkampe, A. Blum, and S. Sebestyen. 2011. Applied Geochemistry 26:S127–S131.

Carbon–mineral interactions along an earthworm invasion gradient at a Sugar Maple Forest in Northern Minnesota

Lyttle, A., K. Yoo, C. Hale, A. K. Aufdenkampe, and S. Sebestyen. 2011. Applied Geochemistry 26:S85–S88.

Characterization and source determination of stream suspended particulate material in White Clay Creek, USA

DL Karwan, R Aalto, AK Aufdenkampe, JD Newbold, & JE Pizzuto. 2011. Applied Geochemistry, 26, S354-S356

Phytoplankton abundance and contributions to suspended particulate matter in the Ohio, Upper Mississippi and Missouri Rivers

Bukaveckas, P. A., A. K. MacDonald, A. Aufdenkampe, J. H. Chick, J. E. Havel, R. Schultz, T. Angradi, D. Bolgrien, T. Jicha, and D Taylor. 2011. Aquatic Sciences 73(3):419–436.

Eating local: influences of habitat on the diet of little brown bats (Myotis lucifugus)

Clare, E. L., R. Brittany, R. Barber, B. W. Sweeney, P. D.N. Hebert, and M. B. Fenton. 2011. Molecular Ecology 20(8): 1772–1780.

Rates of soil mixing and associated carbon fluxes in a forest vs. tilled agricultural field: implications for modeling the soil carbon cycle

Yoo, K., J. Ji, A. Aufdenkampe, and J. Klaminder. 2011. Journal of Geophysical Research: Biogeosciences 116:2156-2202.

Summer-winter transitions in Antarctic ponds II: Biological responses

Hawes, I., K. Safi, J. Webster-Brown, B. Sorrell, and D.B. Arscott. 2011. Summer-winter transitions in Antarctic ponds II: Biological responses. Antarctic Science 23(3):243-254.

Summer-winter transitions in Antarctic ponds I: The physical environment

Hawes, I., K. Safi, B. Sorrell, J. Webster-Brown, and D.B. Arscott. 2011. Antarctic Science 23(3):235–242.

Improving biogeochemical knowledge through technological innovation

Melack, J., A. C. Finzi, D. Siegel, S. MacIntyre, C. Nelson, A. K. Aufdenkampe, and M. Pace. 2011. Frontiers in Ecology and the Environment 9(1):37-43.

Riverine coupling of biogeochemical cycles between land, oceans, and atmosphere

Aufdenkampe, A. K., E. Mayorga, P. A. Raymond, J. M. Melack, S. C. Doney, and S. R. Alin. 2011. Frontiers in Ecology and the Environment 9(1):53-60.

Can DNA barcodes of stream macroinvertebrates improve descriptions of community structure and water quality?

Sweeney, B. W., J. M. Battle, J. K. Jackson, and T. Dapkey. 2011. Journal of the North American Benthological Society 30(1):195-216.

The biology of the limnephilid caddisfly Dicosmoecus gilvipes (Hagen) in Northern California and Oregon (USA) streams

Resh, V. H., M. Hannaford, J. K. Jackson, G. A. Lamberti, and P. K. Mendez. 2011. Zoosymposia 5:413–419.

Why stream mayflies can reproduce without males but remain bisexual: a case of lost genetic variation

Funk, D. H., B. W. Sweeney, and J. K. Jackson. 2010. Journal of the North American Benthological Society 29:1258–1266.

Dissolved CO2 in small catchment streams of eastern Amazonia: A minor pathway of terrestrial carbon loss

Davidson, E., R. Figueiredo, D. Markewitz , A. K. Aufdenkampe. 2010. Journal of Geophysical Research – Biosciences 115:G04005.

A preliminary water quality study of the Rio Sierpe and its tributaries (Costa Rica)

Arscott, D. B., W. Eldridge, and B. W. Sweeney. 2010. Prepared for the Blue Moon Foundation. Stroud Water Research Center, Avondale, Pennsylvania. 

A framework for analyzing longitudinal and temporal variation in river flow and developing flow-ecology relationships

Larned, S.T., D.B. Arscott, J. Schmidt, and J.C. Diett. 2010. Journal of the American Water Resources Association 46(3):541–553.

Water quality functions of a 15-year-old riparian forest buffer system

Newbold, J. D., S. Herbert, B. W. Sweeney, P. Kiry, and S. J. Alberts. 2010. Journal of the American Water Resources Association, 46(2):299-310.

Aquatic invertebrate community structure along an intermittence gradient: Selwyn River, New Zealand

Arscott, D.B., S.T. Larned, M. Scarsbrook, and P. Lambert. 2010. Aquatic invertebrate community structure along an intermittence gradient: Selwyn River, New Zealand. Journal of the North American Benthological Society. 29(2):530–545.

Trophic transfer of Cd from natural periphyton to the grazing mayfly Centroptilum triangulifer in a life cycle test

Xie, L., D. H. Funk, and D. B. Buchwalter. 2010. Environmental Pollution 158:272–277.

First report of Ecpyrrhorrhoe puralis (South)(Pyraloidea: Crambidae: Pyraustinae) in North America: A naturalized exotic Pyraustine from Asia feeding on Paulownia Siebold & Zucc.

Solis, M. A., B. G. Scholtens, J. K. Adams, and D. H. Funk. 2010. The Journal of the Lepidopterists’ Society 64(1):33–35.

Mitigation of nonpoint pollution by a riparian forest buffer in an agricultural watershed of the Mid-Atlantic Piedmont

Newbold, J. D., S. Herbert, and B. W. Sweeney. 2009. Stroud Preserve Watersheds National Monitoring Project Final Report.

Mayfly communities in two neotropical lowland forests

Sweeney, B. W., R. W. Flowers, D. H. Funk, S. Ávila, and J. K. Jackson. 2009. Aquatic Insects 31:311–318.

Monitoring the health of large rivers with macroinvertebrates: do dominant taxa help or hinder the assessment?

Jackson, J. K., J. M. Battle, and B. W. Sweeney. 2009. River Research and Applications 26(8): 931–947.

Emerging concepts in temporary-river ecology

Larned, S.T., T. Datry, D.B. Arscott, and K. Tockner. 2010. Freshwater Biology. 55(4):717–738.

Selenium bioaccumulation and maternal transfer in the mayfly Centroptilum triangulifer in a life-cycle, periphyton-biofilm trophic assay

Conley, J. M., D. H. Funk, and D. B. Buchwalter. 2009. Environmental Science & Technology 43:7952–7957.

Hydrological indices for quantifying ecologically relevant flow conditions in intermittent alluvial plain rivers

Schmidt, J., S.T. Larned, D.B. Arscott, and J.C. Diettrich. 2009. Pages 94–102 in M. Thoms, K. Heal, E. Bogh, A. Chambel, V. Smakhtin (editors). Ecohydrology of Surface and Groundwater Dependent Systems: Concepts, Methods, and Recent Developments. Proceedings of symposium JS1 held at the Joint IAHS & IAH Convention, Hyderabad, India, September 2009. IAHS Publ. 328, 2009.

Mitochondrial lineages and DNA barcoding of closely related species in the mayfly genus Ephemerella (Ephemeroptera:Ephemerellidae)

Alexander, L. C., M. Delion, D. J. Hawthorne, W. O. Lamp, and D. H. Funk. 2009. Journal of the North American Benthological Society 28:584–595.

The boundless carbon cycle

Battin, T. J., S. Luyssaert, L. A. Kaplan, A. K. Aufdenkampe, A. Richter, and L. J. Tranvik. 2009. Nature Geoscience 2:598–600.

Sequential density fractionation across soils of contrasting mineralogy: Evidence for both microbial- and mineral-controlled soil organic matter stabilization

Sollins, P., M. Kramer, C. Swanston, K. Lajtha, T Filley, A. K. Aufdenkampe, R. Wagai and R. D. Bowden. 2009. Biogeochemistry 96(1-3):209–231.

Photochemical degradation of dissolved organic matter and dissolved lignin phenols from the Congo River

Spencer, R. G. M., A. Stubbins, P. J. Hernes, A. Baker, K. Mopper, A. K. Aufdenkampe, R. Y. Dyda, V. L. Mwamba, A. M. Mazedi, et al. 2009. Journal of Geophysical Research-Biogeosciences 114:G03010.

Influence of tree shelters on seedling success in an afforested riparian zone

Andrews, D.M., C.D. Barton, S. J. Czapka, R.K. Kolka, and B.W. Sweeney. 2010. New Forests 39:157–167.

Temporal dynamics of seston: A recurring nighttime peak and seasonal shifts in composition in a stream ecosystem

Richardson, D. C., L. A. Kaplan, J. D. Newbold, and A. K. Aufdenkampe. 2009. Limnology and Oceanography 54(1):344–354.

Mercury(II) bioaccumulation and antioxidant physiology in four aquatic insects

Xie, l., J. L. Flippin, N. Deighton, D. H. Funk, D. A. Dickey, and D. B. Buchwalter. 2009. Environmental Science & Technology 43:934–940.

Water quality in White Clay Creek Watershed from 1991 to 2008

Battle, J. M., and J. K. Jackson. 2008. Stroud Water Research Center.

Water quality monitoring in the source water areas for New York City: An integrative watershed approach

Arscott, D. B., A. K. Aufdenkampe, T. L. Bott, C. L. Dow, J. K. Jackson, L. A. Kaplan, J. D. Newbold, B. W. Sweeney. 2008. Stroud Water Research Center.

Reconstruction of a daily flow record along a hydrologically complex alluvial river

Rupp, D.E., S.T. Larned, D.B. Arscott, J. Schmidt. 2008. Journal of Hydrology 359:88–104.

A taxonomic reassessment of the Drunella lata (Morgan) species complex (Ephemeroptera:Ephemerellidae) in northeastern North America

Funk, D. H., B. W. Sweeney, and J. K. Jackson. 2008. Journal of the North American Benthological Society 27(3):647–663.

A new parthenogenetic mayfly (Ephemeroptera:Ephemerellidae:Eurylophella Tiensuu) oviposits by abdominal bursting in the subimago

Funk, D. H., J. K. Jackson, and B. W. Sweeney. 2008. Journal of the North American Benthological Society 27(2):269–279.

Spatial and temporal variation in streambed bacterial community composition and correlation with environmental variables

Hogan, K. R. 2008. Ph.D. dissertation. University of Pennsylvania, Philadelphia. Adviser: L.A. Kaplan.

Transport, sources, and quality of seston in a Piedmont headwater stream

Richardson, D. C. 2008. Ph.D. dissertation. University of Maryland. Adviser: L.A. Kaplan.

Effects of riparian vegetation and watershed urbanization on fishes in streams of the mid-atlantic piedmont (USA)

Horwitz, R. J., T. E. Johnson, P. F. Overbeck, T. K. O’Donnell, W. C. Hession, and B. W. Sweeney. 2008. Journal of the American Water Resources Association 44(3):1–18.

Untangling the complex issue of dissolved organic carbon uptake: a stable isotope approach

Kaplan, L. A., T. N. Wiegner, J. D. Newbold, P. H. Ostrom, and H. Gandhi. 2008. Freshwater Biology 53:855–864.

Biophysical controls on organic carbon fluxes in fluvial networks

Battin, T. J., L. A. Kaplan, S. Findlay, C. S. Hopkinson, E. Marti, A. I. Packman, J. D. Newbold, and F. Sabater. 2008. Nature Geoscience 1:95–100.

Protecting headwaters: The scientific basis for safeguarding stream and river ecosystems

Kaplan, L. A., T. L. Bott, J. K. Jackson, J. D. Newbold, and B. W. Sweeney. 2008. Stroud Water Research Center.

Fractionation of lignin during leaching and sorption and implications for organic matter “freshness”

Hernes, P. J., A. C. Robinson and A. K. Aufdenkampe. 2007. Geophysical Research Letters 34:L17401.

The Selwyn River of New Zealand: A benchmark system for alluvial plain rivers

Larned, S.T., D.M. Hicks, J. Schmidt, A.J.H. Davey, K. Dey, M. Scarsbrook, D.B. Arscott, R.A. Woods. 2008. River Research and Applications. 24:1–24.

Mesh size affects macroinvertebrate descriptions in large rivers: examples from the Savannah and Mississippi Rivers

Battle, J. M., J. K. Jackson, and B. W. Sweeney. 2007. Hydrobiologia 592:329–343.

Primary productivity and community respiration

Bott, T. L. 2006. Pp.263-290. In F. R. Hauer and G. A. Lamberti (editors). Methods in Stream Ecology, 2nd ed. Elsevier, New York, New York.

Resurrecting the in-stream side of riparian forests

Sweeney, B. W. and J. G. Blaine. 2007. Journal of Contemporary Water Research and Education 136:17–27.

How planting method, weed abatement, and herbivory affect afforestation success

Sweeney, B. W., S. J. Czapka, and C. Petrow. 2007. Southern Journal of Applied Forestry 31:85–92.

Stream insect occupancy-frequency patterns and metapopulation structure

Heatherly, T., M. R. Whiles, D. J. Gibson, S. L. Collins, A. D. Huryn, J. K. Jackson, and M. A. Palmer. 2007. Oecologia 151(2):313–331.

Organic matter in the Peruvian headwaters of the Amazon: Compositional evolution from the Andes to the lowland Amazon mainstem

Aufdenkampe, A. K., E. Mayorga, J. I. Hedges, C. Llerena, P. D. Quay, J. Gudeman, A. V. Krusche and J. E. Richey. 2007. Organic Geochemistry 38(3):337–364.

Annual and spatial variation for macroinvertebrates in the Upper Mississippi River near Cape Girardeau, Missouri

Battle, J. M., J. K. Jackson, and B. W. Sweeney. 2007. Fundamental and Applied Limnology Archiv fur Hydrobiology 168 (1):39–54.

Primary productivity in receiving reservoirs: links to influent streams

Bott, T. L., D. S. Montgomery, D. B. Arscott, C. L. Dow. 2006. Journal of the North American Benthological Society 25(4):1045–1061.

Macroinvertebrate distribution in relation to land use and water chemistry in New York City drinking-water-supply watersheds

Kratzer, E. B., J. K. Jackson, D. B. Arscott, A. K. Aufdenkampe, C. L. Dow, L. A. Kaplan, J. D. Newbold, and B. W. Sweeney. 2006. Journal of the North American Benthological Society 25:954–976.

Organic matter transport in New York City drinking-water-supply watersheds

Kaplan, L. A., J. D. Newbold, D. J. Van Horn, C. L. Dow, A. K. Aufdenkampe, and J. K. Jackson. 2006. Journal of the North American Benthological Society 25:912–927.

Uptake of nutrients and organic C in streams in New York City drinking-water-supply watersheds

Newbold, J. D., T. L. Bott, L. A. Kaplan, C. L. Dow, J. K. Jackson, A. K. Aufdenkampe, L. A. Martin, D. J. Van Horn, A. A. Long. 2006. Journal of the North American Benthological Society 25(4):998–1017.

Molecular tracers of soot and sewage contamination in streams supplying New York City drinking water

Aufdenkampe, A. K., D. B. Arscott, C. L. Dow, L. J. Standley. 2006. Journal of the North American Benthological Society 25(4):928–953.

Ecosystem metabolism in streams of the Catskill Mountains (Delaware and Hudson River watersheds) and Lower Hudson Valley

Bott, T. L., D. S. Montgomery, J. D. Newbold, D. B. Arscott, C. L. Dow, A. K. Aufdenkampe, J. K. Jackson, L. A. Kaplan. 2006. Journal of the North American Benthological Society 25(4):1018–1044.

Landscape template of New York City’s drinking-water-supply watersheds

Arscott, D. B., C. L. Dow, B. W. Sweeney. 2006. Journal of the North American Benthological Society 25 (4):867–886.

Role of rarity and taxonomic resolution in a regional and spatial analysis of stream macroinvertebrates

Arscott, D. B., J. K. Jackson, E. B. Kratzer. 2006. Journal of the North American Benthological Society 25(4):977–997.

Relating major ions and nutrients to watershed conditions across a mixed-use, water-supply watershed

Dow, C. L., D. B. Arscott, J. D. Newbold. 2006. Journal of the North American Benthological Society 25(4):887–911.

Taxonomy and genetics of the parthenogenetic mayfly Centroptilum triangulifer and its sexual sister Centroptilum alamance (Ephemeroptera:Baetidae)

Funk, D. H., J. K. Jackson, and B. W. Sweeney. 2006. Journal of the North American Benthological Society 25(2):417–429.

Enhanced source-water monitoring for New York City: historical framework, political context, and project design

Blaine, J. G., B. W. Sweeney, D. B. Arscott. 2006. Journal of the North American Benthological Society 25(4):851–866.

Enhanced source-water monitoring for New York City: summary and perspective

Sweeney, B. W., D. B. Arscott, C. L. Dow, J. G. Blaine, A. K. Aufdenkampe, T. L. Bott, J. K. Jackson, L. A. Kaplan, J. D. Newbold. 2006. Journal of the North American Benthological Society 25(4):1062–1067.

Ecosystem metabolism in Piedmont streams: reach geomorphology modulates the influence of riparian vegetation

Bott, T. L., J. D. Newbold, and D. B. Arscott. 2006. Ecosystems 9:398–421.

Biodegradable dissolved organic matter in a temperate and a tropical stream determined from ultra-high resolution mass spectrometry

Kim, S., L. A. Kaplan, and P. G. Hatcher. 2006. Limnology and Oceanography 51:1054–1063.

Long-term studies of aquatic invertebrates: frequency, duration, and ecological significance

Jackson, J. K., and L. Füreder. 2006. Freshwater Biology 51(3):591–603.

Recurring seasonal dynamics of microbial communities in stream habitats

Hullar, M. A. J., L. A. Kaplan, and D. A. Stahl. 2006. Applied and Environmental Microbiology 72:713–722.

Atlantic coast rivers of the northeastern United States

Jackson, J. K., A. D. Huryn, D. L. Strayer, D. L. Courtemanch, and B. W. Sweeney. 2005. Pages 21-71 in A.  C. Benke and C. E. Cushing (editors). Rivers of North America. Academic Press, San Diego, California.

Synthesis of 13C-labeled tracer for stream DOC: Labeling tulip poplar carbon with 13CO2

Wiegner, T. N., L. A. Kaplan, J. D. Newbold, and P. H. Ostrom. 2005. Ecosystems 8:501–511.

Young organic matter as a source of carbon dioxide outgassing from Amazonian rivers

Mayorga, E., A. K. Aufdenkampe, C. A. Masiello, A. V. Krusche, J. I. Hedges, P. D. Quay and J. E. Richey. 2005. Nature 436(7050):538–541.

Lateral organization of aquatic invertebrates along the continuum of a braided-floodplain river

Arscott, D.B., K. Tockner, J.V. Ward. 2005. Journal of the North American Benthological Society 24:934–945.

Efeitos das mudanças do uso da terra na biogeoquímica dos corpos d’água da bacia do rio Ji-Paraná Rondônia

Krusche, A. V., M. V. R. Ballester, R. L. Victoria, M. C. Bernardes, N. K. Leite, L. Hanada, R. Marcondes, D. dC. Victoria, A. M. Toledo, J. P. Ometto, M. Z. Moreira, B. M. Gomes, M. A. Bolson, S. G. Neto, N. Bonelli, L. Deegan, C. Neill, S. Thomas, A. K. Aufdenkampe, and J. E. Richey. 2005. Acta Amazônica 35(2):197–205.

Contribution of dissolved organic carbon to stream metabolism estimated with 13C-enriched tree tissue leachate

Wiegner, T. N., L. A. Kaplan, J. D. Newbold, and P. H. Ostrom. 2005. Journal North American Benthological Society 24:48–67.

Molecular characterization of biodegradable dissolved organic matter using bioreactors and [12C/13C] tetramethylammonium hydroxide thermochemolysis GC-MS

Frazier, S. W., L. A. Kaplan, and P. G. Hatcher. 2005. Environmental Science and Technology 39:1479–1491.

Riparian deforestation, stream narrowing, and loss of stream ecosystem services

Sweeney, B. W., T. L. Bott, J. K. Jackson, L. A. Kaplan, J. D. Newbold, L. J. Standley, W. C. Hession, R. J. Horwitz. 2004. Proceedings of the National Academy of Sciences 101(30):14132–14137.

Riverine organic matter composition as a function of land use changes, southwest Amazon

Bernardes, M. C., L. A. Martinelli, A. V. Krusche, J. Gudeman, M. Moreira, R. L. Victoria, J. P. H. B. Ometto, M. V. R. Ballester, A. K. Aufdenkampe, et al. 2004. Ecological Applications 14(4):S263–S279.

Riparian forest restoration: why each site needs an ecological prescription

Sweeney, B. W. and S. J. Czapka. 2004. Forest Ecology and Management 192:361–373.

Isotopic (13C) analysis of dissolved organic carbon in stream water samples using an elemental analyzer coupled to a stable isotope ratio mass spectrometer

Gandhi, H., T. N. Wiegner, P. H. Ostrom, L. A. Kaplan, N. E. Ostrom. 2004. Rapid Communications in Mass Spectrometry 18:903–906.

Spatio-temporal patterns of benthic invertebrates along the river continuum of a braided Alpine river

Arscott, D.B., K. Tockner, and J.V. Ward. 2003. Archiv für Hydrobiologie 158:431–460.

Contributions of microbial biofilms to ecosystem processes in stream mesocosms

Battin, T. J., L. A. Kaplan, J. D. Newbold, and C. E. Hansen. 2003b. Nature 426:439–442.

Sources and distribution of organic carbon and nitrogen in the Tagliamento River, Italy

Kaiser, E., D.B. Arscott, K. Tockner, and B. Sulzberger. 2004. Aquatic Sciences 66:103–116.

Characterization of organic matter from natural waters using tetramethylammonium hydroxide thermochemolysis GC-MS

Frazier, S. W., K. O. Nowack, K. M. Goins, F. S. Cannon, L. A. Kaplan, and P. G. Hatcher. 2003. Journal of Analytical and Applied Pyrolysis 70:99–128.

Where rivers are born: The scientific imperative for defending small streams and wetlands

Meyer, J.L. L. A. Kaplan, J. D. Newbold, D. L. Strayer, C. J. Woltemade, J. B. Zedler, R. Beilfuss, Q. Carpenter, R. Semlitsch, M. C. Watzin, and P. H. Zedler. 2003. Sierra Club and American Rivers.

Simultaneous analyses of neutral carbohydrates and amino sugars in freshwaters with HPLC-PAD

Cheng, X., and L. A. Kaplan. 2003. Journal of Chromatographic Science 41:434–438.

Effects of current velocity on the nascent architecture of stream microbial biofilms

Battin, T. J., L. A. Kaplan, J. D. Newbold, X. Cheng, and C. Hansen. 2003c. Applied and Environmental Microbiology. 63:5443–5452.

The Tagliamento River: a model ecosystem of European importance

Tockner, K., J.V. Ward, D.B. Arscott, P.J. Edwards, J. Kollmann, A.M. Gurnell, G.E. Petts, B. Maiolini. 2003. The Tagliamento River: A model ecosystem of European importance. Aquatic Sciences 65:239–253.

Habitat structure and Trichoptera diversity in two headwater flood plains, N.E. Italy

Arscott, D.B., B. Keller, K. Tockner, J.V. Ward. 2003. International Review of Hydrobiology 88: 255–273.

Dietary and stable isotope (δ 13C, δ 15N) analyses in alpine stream insects

Füreder, L., C. Welter, and J. K. Jackson. 2003. International Review of Hydrobiology 88:314–331.

A mixing model analysis of stream solute dynamics and the contribution of a hyporheic zone to ecosystem function

Battin, T. J., L. A. Kaplan, J. D. Newbold, and S. P. Hendricks. 2003a. Freshwater Biology:48:995–1014.

Coupling of hydrodynamical, biological, and geochemical processes in streambeds

Packman, A. I., T. J. Battin, and J. D. Newbold. 2003. Archives of Hydro-Engineering and Environmental Mechanics 50:107–123.

Comparison of corn pollen and natural fine particulate matter transport in streams: can pollen be used as a seston surrogate?

Georgian, T., J. D. Newbold, S. A. Thomas, M. T. Monaghan, G. W. Minshall, and C. E. Cushing. 2003.  Journal of the North American Benthological Society 22:2–15.

Dietary and stable isotope (δ 13C, δ 15N) analyses in alpine Ephemeroptera and Plecoptera

Füreder, L., C. Welter, and J. K. Jackson. 2003. Dietary and stable isotope (δ13C, δ15N) analyses in alpine Ephemeroptera and Plecoptera. Pages 39-46 in E. Gaino (editor). Research Update on Ephemeroptera and Plecoptera. University of  Perugia, Perugia, Italy.

Aquatic habitat dynamics along a braided alpine river ecosystem (Tagliamento River, Northeast Italy)

Arscott, D.B., K. Tockner, D. van der Nat, and J.V. Ward. 2002. Ecosystems 5:802–814.

The role of monomers in stream ecosystem metabolism

Kaplan, L. A., and J. D. Newbold. 2002. Pages 97–119 in S. E. G. Findlay and R. L. Sinsabaugh (editors). Aquatic Ecosystems — Interactivity of Dissolved Organic Matter. Academic Press, Cambridge, Massachusetts.

Larval black fly (Diptera: Simuliidae) distribution and diversity along a floodplain river in the Alps (Tagliamento River, Italy)

Arscott, D.B., R. Glatthaar, K. Tockner, J.V. Ward. 2002. Verhandlungen Internationale Vereinigung Limnologie 28:524–531.

Replicated field experiments examining the effects of Bti on black flies and nontarget macroinvertebrates and fish in a large river

Jackson, J. K., R. J. Horwitz, and B. W. Sweeney. 2002. Transactions of the American Fisheries Society 131(5):910–930.

Riparian forest restoration: increasing success by reducing plant competition and herbivory

Sweeney, B. W., S. J. Czapka, and T. Yerkes. 2002. Restoration Ecology 10(2):1–9.

The effects of nonindigenous Norway maple (Acer platanoides) on an aquatic insect community

Fenstermacher, H. 2002. M.S. Thesis, Entomology and Applied Ecology, University of Delaware. Adviser: J.K. Jackson.

Riverine landscape diversity

Ward, J.V., K. Tockner, D.B. Arscott, C. Claret. 2002. Freshwater Biology 47: 517–539.

Effects of Bacillus thuringiensis israelensis on black flies and nontarget macroinvertebrates and fish in a large river

Jackson, J. K., R. J. Horwitz, and B. W. Sweeney. 2002. Transactions of the American Fisheries Society 131:910–930.

Assessment of relative accuracy in the determination of organic matter concentrations in aquatic systems

Aiken, G., L. A. Kaplan, and J. Weishaar. 2002. Journal of Environmental Monitoring. 4:70–74.

Thermal heterogeneity along a braided floodplain river in the Alps (Tagliamento River, N.E. Italy)

Arscott, D.B., K. Tockner, and J.V. Ward. 2001. Canadian Journal of Fisheries and Aquatic Sciences 58:2359–2373.

Using reference sites and simple linear regression to estimate long-term water levels in Coastal Plain streams

Zampella, R.A., C.L. Dow, and J.B. Bunnell. 2001. Journal of the American Water Resources Association 37(5):1189–1201.

The influence of particle size on the deposition of seston in streams

Thomas, S. A., J. D. Newbold, M. T. Monaghan, G. W. Minshall, T. Georgian, and C. E. Cushing. 2001. Limnology and Oceanography 46:1425–1424.

Influence of stream size on ammonium and suspended particulate nitrogen processing

Wollheim, W.M., B.J. Peterson, L.A. Deegan, J.E. Hobbie, B. Hooker, W.B. Bowden, K.J. Edwardson, D.B. Arscott, and A.E. Hershey. 2001. Limnology and Oceanography 46: 1–13.

Improved analysis of dissolved carbohydrates in stream water

Cheng, X., and L. A. Kaplan. 2001. Analytical Chemistry 73:458–461.

Aquatic habitat diversity along the corridor of an alpine floodplain river (Fiume Tagliamento, Italy).

Arscott, D.B., K. Tockner, and J.V. Ward. 2000. Archiv für Hydrobiologie 49:679–704.

Specific conductance and pH as watershed disturbance indicators in streams of the New Jersey Pinelands, U.S.A.

Dow, C.L., and R.A. Zampella. 2000. Environmental Management 26(4):437–445.

Trends in evaporation and Bowen Ratio on urbanizing watersheds in eastern United States

Dow, C.L. and D.R. DeWalle. 2000. Water Resources Research 36(7):1835–1843.

Molecular tracers of organic matter sources to surface water resources

Standley, L. J., L. A. Kaplan, and D. Smith. 2000. Environmental Science and Technology 34:3124–3130.

Effects of desiccation and temperature/irradiance on the metabolism of two arctic stream bryophyte taxa

Arscott, D.B., W.B. Bowden, and J.C. Finlay. 2000. Journal of the North American Benthological Society 19:263–273.

The effect of formalin and Lugol’s iodine solution on protozoal cell volume

Zinabu, G. M. and T. L. Bott. 2000. Limnologica 30:59–63.

Courtship role reversal and deceptive signals in the long-tailed dance fly, Rhamphomyia longicauda

Funk, D. H., and D. W. Tallamy. 2000. Animal Behaviour 59(2):411–421.

Surface and subsurface dissolved organic carbon

Kaplan, L. A., and J. D. Newbold. 2000. Pages 237–258 in J. B. Jones and P. J. Mulholland (editors). Streams and ground waters. Academic Press, Cambridge, Massachusetts.

Paired comparisons of effects of type of riparian vegetation on stream fishes: implications for restoration

Horwitz, R. J., W. C. Hession, and B. W. Sweeney. 2000. American Water Resources Association 197–202.

Long-term movements of self-marked caddisfly larvae (Trichoptera: Sericostomatidae) in a coastal mountain stream, California, USA

Jackson, J. K., E. P. McElravy, V. H. Resh. 1999. Freshwater Biology 42(3):525–536.

Review of Tropical Asian streams: Zoobenthos, ecology and conservation by D. Dudgeon

Jackson, J. K. 1999. Journal of the North American Benthological Society 18:427–428.

Roles of bryophytes in stream ecosystems

Stream Bryophyte Group. 1999. Journal of the North American Benthological Society 18:151–184.

Detecting baseflow trends in Coastal Plain streams

Dow, C.L. 1999. Journal of the American Water Resources Association 35(2):349–362.

Structure and function of stream biota

Jackson, J. K. 1998. In Stream Corridor Restoration: Principles, Processes and Practices, by the Federal Interagency Stream Restoration Working Group. USDA Natural Resources Conservation Service, PB98-158348LUW ISBN-0-934213-59-3.

Comparison of epilithic algal and bryophyte metabolism in an arctic tundra stream, Alaska

Arscott, D.B., W.B. Bowden, J.C. Finlay. 1998. Journal of the North American Benthological Society 17:210–227.

Water quality functions of riparian forest buffer systems in the Chesapeake Bay Watersheds

Lowrance, R., L. S. Altier, J. D. Newbold, R. R. Schnabel, P. M. Groffman, J. M. Denver, D. L. Correll, J. W. Gilliam, J. L. Robinson, R. B. Brinsfield, K. W. Staver, W. C. Lucas, and A. H. Todd. 1997. Environmental Management 21:687–712.

Sulfur and nitrogen budgets for five forested Appalachian Plateau Basins

Dow, C.L., and D.R. DeWalle. 1997. Hydrological Processes 11:801–816.

Organic matter dynamics in White Clay Creek, Pennsylvania, USA

Newbold, J. D., T. L. Bott, L. A. Kaplan, B. W. Sweeney, and R. L. Vannote. 1997. Journal of the North American Benthological Society 16:46–50.

Biology of Gumaga nigricula (McL.) in a northern California stream

Resh, V. H., J. R. Wood, E. A. Bergey, J. W. Feminella, J. K. Jackson, and E. P. McElravy. 1997. Pages 401–410 in Proceedings of the 8th International Symposium on Trichoptera. Ohio Biological Survey.

Report: Water quality functions of riparian forest buffer systems in the Chesapeake Bay Watershed

Lowrance, R., L. S. Altier, J. D. Newbold, R. R. Schnabel, P. M. Groffman, J. M. Denver, D. L. Correll, J. W. Gilliam, J. L. Robinson, R. B. Brinsfield, K. W. Staver, W. C. Lucas, and A. H. Todd. 1995. Chesapeake Bay Program Technology Transfer Report. U.S. Environmental Protection Agency, EPA 903-R-95-004 CBP/TRS 134/95.

Organochlorine pesticides in stream mayflies and terrestrial vegetation of undisturbed tropical catchments exposed to long-range atmospheric transport

Standley, L. J., and B. W. Sweeney. 1995. Journal of the North American Benthological Society 14:38–49.

Research in tropical streams and rivers: introduction to a series of papers

Jackson, J.K., and B.W. Sweeney. 1995. Journal of the North American Benthological Society 14:2–4.

Tropical stream and river research: Introduction to a series of papers

Jackson, J. K. and B. W. Sweeney. 1995. Journal of the North American Benthological Society 14:2–4.

Present status and future directions of tropical stream research

Jackson, J. K., and B. W. Sweeney. 1995. Journal of the North American Benthological Society 14:5–11.

Concentrations and export of solutes from six mountain streams in northwestern Costa Rica

Newbold, J. D., B. W. Sweeney, J. K. Jackson, and L. A. Kaplan. 1995. Journal of the North American Benthological Society 14:21–37.

Egg and larval development times for 35 species of tropical stream insects from Costa Rica

Jackson, J. K. and B. W. Sweeney. 1995. Journal of the North American Benthological Society 14:115–130.

Semivoltinism, seasonal emergence, and adult size variation in a tropical stream mayfly (Euthyplocia hecuba)

Sweeney, B.W., J.K. Jackson, and D.H. Funk. 1995. Journal of the North American Benthological Society 14(1):131–146.

Maternal transfer of chlordane and its metabolites to the eggs of a stream mayfly Centroptilum triangulifer

Standley, L.J., B.W. Sweeney, and D.H. Funk. 1994. Environmental Science & Technology 28(12):2105–2111.

The larvae of Eastern North American Eurylophella Tiensuu (Ephemeroptera: Ephemerellidae)

Funk, D.H. and B.W. Sweeney. 1994. Transactions of the American Entomological Society 120(3):209–286.

Blizzard’s effects on Appalachian stream chemistry assessed

Dow, C.L., D.R. DeWalle, J.A. Lynch, and W.E. Sharpe. 1994. EOS  75(34):389.

A model for seasonal synchrony in stream mayflies

Newbold, J.D., B. W. Sweeney, and R. L. Vannote. 1994. Journal North American Benthological Society 13:3–18.

Transport of Bacillus thuringiensis var. israelensis and its effect on drift and benthic densities of nontarget macroinvertebrates in the Susquehanna River, northern Pennsylvania

Jackson, J.K., B.W. Sweeney, T.L. Bott, J.D. Newbold, and L.A .Kaplan. 1994. Canadian Journal of Fisheries and Aquatic Sciences 51:295–314.

Effects of streamside vegetation on macroinvertebrate communities of White Clay Creek in eastern North America

Sweeney, B. W. 1993. Proceedings of the Academy of Natural Sciences of Philadelphia 144:291–340.

Rapid assessment approaches in benthic macroinvertebrate biomonitoring studies

Resh, V.H., and J.K. Jackson. 1993. Pages 195-233 in D. M. Rosenberg and V. H. Resh (editors), Freshwater biomonitoring and benthic macroinvertebrates. Chapman and Hall, New York, New York.

Use of the stream mayfly Cloeon triangulifer as a bioassay organism: life history response and body burden following exposure to technical chlordane

Sweeney, B.W., D.H. Funk, and L.J. Standley. 1993. Environmental Toxicology and Chemistry 12(1):115–125.

Climate change and the life histories and biogeography of aquatic insects in eastern North America

Sweeney, B.W., J.K. Jackson, J.D. Newbold, and D.H. Funk. 1992. Pages 143–176 in Firth and S. G. Fisher (editors). Global climate change and freshwater ecosystems. Springer-Verlag, New York, New York.

Electrophoretic analysis of species boundaries and phylogenetic relationships in some Taeniopterygid stoneflies (Plecoptera)

Funk, D.H., and B.W. Sweeney. 1990. Transactions of the American Entomological Society 116(3):727–751.

Science in pictures: The mating of tree crickets

Funk, D.H.. 1989. Scientific American 261(2):50–59.

Electrophoretic study of Eastern North American Eurylophella (Ephemeroptera: Ephemerellidae) with the discovery of morphologically cryptic species

Funk, D.H., B.W. Sweeney, and R.L. Vannote. 1988. Annals of the Entomological Society of America 81(2):174–186.

Genetic variation in stream mayfly (Insecta: Ephemeroptera) populations in eastern North America

Sweeney. B.W., D.H. Funk, and R.L. Vannote. 1987. Annals of the Entomological Society of America 80:600–612.

Geographic parthenogenesis in the stream mayfly Eurylophella funeralis in eastern North America

Sweeney, B. W. and R. L. Vannote. 1987. Holarctic Ecology 10:52–59.

Population genetic structure of two mayflies (Ephemerella subvaria, Eurylophella verisimilis) in the Delaware River drainage basin

Sweeney, B.W., D.H. Funk, and R.L. Vannote. 1986. Journal of the North American Benthological Society 5(4): 253-262.

Growth and production of a stream stonefly

Sweeney, B. W., and R. L. Vannote. 1986. Ecology 67:1396–1410.

Effects of temperature and food quality on growth and development of a mayfly, Leptophlebia intermedia

Sweeney, B. W., R. L. Vannote, and P. J. Dodds. 1986. Canadian Journal of Fisheries and Aquatic Sciences 43:12–18.

Larval feeding and growth rate of the stream cranefly Tipula abdominalis in gradients of temperature and nutrition

Vannote, R. L. and B. W. Sweeney. 1985. Proceedings of the Academy of Natural Sciences of Philadelphia 137:119–128.

Factors influencing life history patterns of aquatic insects

Sweeney, B. W. 1984. Pages 56–100 in V. H. Resh and D. Rosenberg (eds.) Ecology of aquatic insects. Praeger Scientific Publishers, New York, New York.

Population synchrony in mayflies: a predator satiation hypothesis

Sweeney, B. W. and R. L. Vannote 1982. Evolution 36:810–821.

Life history, developmental processes, and energetics of the burrowing mayfly Dolania americana

Harvey R.S., Vannote R.L., Sweeney B.W. 1980. Life History, Developmental Processes, and Energetics of the Burrowing Mayfly Dolania Americana. Pages 211–230 in Flannagan J.F., Marshall K.E. (editors). Advances in Ephemeroptera Biology. Springer, Boston, Massachusetts.

Effects of logging on macroinvertebrates in streams with and without buffer strips

Newbold, J. D., D. C. Erman, and K. B. Roby. 1980. Canadian Journal of Fisheries and Aquatic Sciences 37(7):1076–1085.

Biology, ecophysiology, and energetics of Sigara alternata (Say) in White Clay Creek

Schnack, J. A., B. W. Sweeney, and R. L. Vannote. 1978. Physis Sección B 37(93):89–98.

Bioenergetic and developmental response of a mayfly to thermal variation

Bernard W. Sweeney. 1978. Limnology and Oceanography 23(3):461–477.

Size variation and the distribution of hemimetabolous aquatic insects: Two thermal equilibrium hypotheses

Sweeney, B. W., and R. L. Vannote. 1978. Science 200 (4340):444–446.